# Fedora ## Fedora 38 ### Operating system packages We use the operating system packages for most of the dependencies. In this example, we use MPICH for MPI and the corresponding HDF5 library. ```bash dnf install -y \ gcc \ gcc-c++ \ make \ file \ diffutils \ automake \ autoconf \ libtool \ curl \ openssh \ python3 \ python3-devel \ python3-pip \ zlib \ zlib-devel \ blas \ blas-devel \ lapack \ lapack-devel \ atlas \ atlas-devel \ openssl \ openssl-libs \ unzip \ git \ ca-certificates \ mpich-devel \ hdf5-mpich \ hdf5-mpich-devel \ sqlite \ sqlite-libs \ sqlite-devel \ proj \ proj-devel \ cmake ``` ### Environment variables ``` export PYTHON_VERSION=3.11 export HDF5_INCDIR=/usr/include/mpich-x86_64 export HDF5_LIBDIR=/usr/lib64/mpich/lib PREFIX_DIR=$HOME/pylith PATH=$PATH:/usr/lib64/mpich/bin ``` ### Configure ```bash $HOME/src/pylith/pylith-installer-4.1.3-0/configure \ --prefix=$PREFIX_DIR \ --with-fetch=curl \ --with-fortran=no \ --with-make-threads=$(nproc) \ --with-hdf5-incdir=${HDF5_INCDIR} \ --with-hdf5-libdir=${HDF5_LIBDIR} \ --disable-mpi \ --disable-cmake \ --disable-sqlite \ --disable-hdf5 \ --disable-proj \ --enable-catch2 \ --enable-h5py \ --enable-netcdf \ --enable-netcdfpy ``` ## Fedora 39 ### Operating system packages We use the operating system packages for most of the dependencies. In this example, we use OpenMPI for MPI and the corresponding HDF5 library. ```bash dnf install -y \ gcc \ gcc-c++ \ make \ file \ diffutils \ automake \ autoconf \ libtool \ curl \ openssh \ python3 \ python3-devel \ python3-pip \ zlib \ zlib-devel \ blas \ blas-devel \ lapack \ lapack-devel \ atlas \ atlas-devel \ openssl \ openssl-libs \ unzip \ git \ ca-certificates \ openmpi-devel \ hdf5-openmpi \ hdf5-openmpi-devel \ sqlite \ sqlite-libs \ sqlite-devel \ proj \ proj-devel \ cmake ``` ### Environment variables ``` export PYTHON_VERSION=3.12 export HDF5_INCDIR=/usr/include/openmpi-x86_64 export HDF5_LIBDIR=/usr/lib64/openmpi/lib PREFIX_DIR=$HOME/pylith PATH=$PATH:/usr/lib64/openmpi/bin ``` ### Configure ```bash $HOME/src/pylith/pylith-installer-4.1.3-0/configure \ --prefix=$PREFIX_DIR \ --with-fetch=curl \ --with-fortran=no \ --with-make-threads=$(nproc) \ --with-hdf5-incdir=${HDF5_INCDIR} \ --with-hdf5-libdir=${HDF5_LIBDIR} \ --disable-mpi \ --disable-cmake \ --disable-sqlite \ --disable-hdf5 \ --disable-proj \ --enable-catch2 \ --enable-h5py \ --enable-netcdf \ --enable-netcdfpy ```